Paraburkholderia phytofirmans OLGA172

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia phytofirmans OLGA172 is a Gram-negative, rod-shaped bacterium that thrives in terrestrial environments and exhibits obligate aerobic metabolism. This microbe does not undergo sporulation, indicating that it relies on alternative survival strategies in its habitat. The optimal growth temperature for P. phytofirmans OLGA172 is approximately 30.0°C, suggesting a preference for moderate warmth typically found in soil ecosystems. As a member of the Burkholderia genus, P. phytofirmans OLGA172 may possess traits that contribute to plant health and soil dynamics, although specific interactions require further investigation. Its aerobic nature implies a potential role in the oxidation of organic compounds in soil, which could influence nutrient cycling and soil fertility. This bacterium's adaptation to terrestrial habitats and its aerobic requirements may also play a significant role in its interactions with other soil microorganisms, potentially affecting microbial community structure and function. Further studies could elucidate the ecological roles of P. phytofirmans OLGA172 in different soil types and its potential applications in agricultural microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia phytofirmans
StrainOLGA172

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Paraburkholderia phytofirmans OLGA172
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia phytofirmans OLGA172


Gene Summary

Adenine Count

697652 bp

Thymine Count

694443 bp

Guanine Count

1050335 bp

Cytosine Count

1055191 bp

Genome Length

3497621 bp

Protein-coding Genes

3117 genes

Non-Coding Genes

35 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinAYM40_RS37695Not Available-749 - 107812058.4
para family proteinAYM40_RS37700P07175-1075 - 175824441.1
replication initiation proteinAYM40_RS37705Not Available+3264 - 405529796.2
hypothetical proteinAYM40_RS37710Not Available-4269 - 45208783.68
hypothetical proteinAYM40_RS37720Not Available-4941 - 529713303.7
xre family transcriptional regulatorAYM40_RS37725Not Available-6104 - 639110515.7
type ii toxin-antitoxin system rele/pare family toxinAYM40_RS37730Not Available-6436 - 681014158.6
hypothetical proteinAYM40_RS41720Not Available+7332 - 789820663.1
is66 family transposaseAYM40_RS37740P50360-7911 - 950059409.9
is66 family insertion sequence element accessory protein tnpbAYM40_RS37745P50359-9552 - 989912705.5

Displaying genes 1 – 10 of 7789 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

224 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da

Displaying 1–10 of 224 metabolites