Halobacterium hubeiense str. JI20-1

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Halobacteriaceae

Genus

Halobacterium

Description

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHalobacteriaceae
GenusHalobacterium
SpeciesHalobacterium hubeiense
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halobacterium hubeiense str. JI20-1

Accession NumberNZ_LN831303.1

Gene Summary

Adenine Count

69594 bp

Thymine Count

70379 bp

Guanine Count

104297 bp

Cytosine Count

105252 bp

Genome Length

349522 bp

Protein-coding Genes

333 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
simpl domain-containing proteinHHUB_RS00555Not Available+108642 - 10939725689.2
tigr00341 family proteinHHUB_RS00560Not Available+109445 - 11074045581.4
nog1 family proteinHHUB_RS00565Not Available-110741 - 11172736076.9
duf5518 domain-containing proteinHHUB_RS00570Not Available+111821 - 11218311658.7
phosphoribosyl-atp diphosphataseHHUB_RS00575Not Available-112184 - 11246810579.1
bifunctional nuclease family proteinHHUB_RS00580Not Available-112465 - 11291115675.1
pyridoxal 5'-phosphate synthase glutaminase subunit pdxtHHUB_RS00585Not Available-112934 - 11353321160.6
preprotein translocase subunit sec61betaHHUB_RS00590Not Available-113579 - 1137405582.67
thioredoxinHHUB_RS00595Not Available+113932 - 11420110118.5
slc13 family permeaseHHUB_RS00600Not Available+114305 - 11617066109.6

Displaying genes 621 – 630 of 3360 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

19 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002759dTDP-beta-L-rhamnoseC16H24N2O15P2Not availableNot available
Average546.316Da
Monoisotopic546.066289237Da
BASm00031102-dehydro-3-deoxy-D-galactonateC6H10O6Chemical structure of 2-dehydro-3-deoxy-D-galactonateNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm00033532-dehydro-3-deoxy-6-phospho-D-galactonateC6H8O9PChemical structure of 2-dehydro-3-deoxy-6-phospho-D-galactonate32120-43-7
Average255.0961Da
Monoisotopic254.9905934Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034237-phospho-2-dehydro-3-deoxy-D-arabino-heptonateC7H10O10PChemical structure of 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonateNot available
Average285.122Da
Monoisotopic285.0028043Da
BASm0003432di-trans,octa-cis-undecaprenyl diphosphateC55H89O7P2Chemical structure of di-trans,octa-cis-undecaprenyl diphosphateNot available
Average924.259Da
Monoisotopic923.609999942Da
BASm00037914-deoxy-4-formamido-alpha-L-arabinopyranosyl di-trans,octa-cis-undecaprenyl phosphateC61H99NO8PChemical structure of 4-deoxy-4-formamido-alpha-L-arabinopyranosyl di-trans,octa-cis-undecaprenyl phosphateNot available
Average1005.436Da
Monoisotopic1004.71137973Da

Displaying 1–10 of 19 metabolites