Halobacterium salinarum NRC-1

Gram-negativeRodNon-motileAerobe

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Halobacteriaceae

Genus

Halobacterium

Description

Halobacterium salinarum NRC-1 is a Gram-negative, rod-shaped archaeon that thrives in specialized habitats, typically characterized by high salinity. This organism is a nonsporulating microbe that exhibits a preference for an optimal growth temperature of 42.0°C. As a chemoorganotroph, Halobacterium salinarum NRC-1 derives its energy from organic compounds, which is particularly relevant in its saline environment where organic matter may be limited. Halobacterium salinarum NRC-1 is an aerobe, indicating its reliance on oxygen for metabolic processes, which further underscores its adaptation to environments where oxygen is available. The unique combination of its morphological characteristics, energy acquisition strategy, and oxygen requirements highlights its specialized role in salt-rich ecosystems. This organism's adaptations not only allow it to withstand extreme salinity but also position it as a potential model for studying extremophilic adaptations and the metabolic pathways utilized by microbes in extreme environments. The insights gained from Halobacterium salinarum NRC-1 could enhance our understanding of microbial life in similar extreme conditions, shedding light on the evolutionary processes that enable survival and function in such specialized niches.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHalobacteriaceae
GenusHalobacterium
SpeciesHalobacterium salinarum
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Halobacterium salinarum NRC-1
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature42
Temperature rangeMesophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Halobacterium salinarum NRC-1

Accession NumberNC_001869.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

200 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
cog1361 s-layer family proteinVNG_RS00010Not Available+248 - 145340588.9
abc transporter atp-binding proteinVNG_RS00015Not Available+1450 - 211523978.2
abc transporter permeaseVNG_RS00020Not Available+2145 - 325439013.7
stt3 domain-containing proteinVNG_RS00025Not Available+3322 - 564380629.0
glutamine--fructose-6-phosphate transaminase (isomerizing)VNG_RS00030Not Available-5646 - 745163634.4
sugar phosphate nucleotidyltransferaseVNG_RS00035Not Available-7454 - 864141410.5
bifunctional sugar-1-phosphate nucleotidylyltransferase/acetyltransferaseVNG_RS00040Not Available-8655 - 986041803.1
sugar transferaseVNG_RS00045Not Available+9980 - 1141351962.6
rna-guided endonuclease tnpb family proteinVNG_RS00050Not Available-11478 - 1273446407.8
aconitase family proteinVNG_RS14640Not Available+12975 - 131877633.05

Displaying genes 1 – 10 of 2750 in total

Pathways

23 pathways

Metabolites

88 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0012554N-acetyl-beta-D-glucosaminyl-(1->4)-1,6-anhydro-N-acetyl-beta-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioate-D-alanineC37H57N7O20Not availableNot available
Average919.893Da
Monoisotopic919.366934423Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da

Displaying 1–10 of 88 metabolites