Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium ummariense |
| Strain | RL-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
831480 bp
Thymine Count
831934 bp
Guanine Count
1547934 bp
Cytosine Count
1542693 bp
Genome Length
4754053 bp
Protein-coding Genes
4608 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Nicotinate phosphoribosyltransferase | M529_05505 | Not Available | + | 1081969 - 1083273 | 49566.3 |
| Transposase | M529_05510 | Not Available | + | 1083446 - 1083985 | 20322.3 |
| hypothetical protein | M529_05515 | Not Available | - | 1084187 - 1084438 | 9349.61 |
| hypothetical protein | M529_05520 | Not Available | + | 1084537 - 1085136 | 22525.7 |
| hypothetical protein | M529_05525 | Not Available | + | 1085716 - 1086948 | 45203.0 |
| hypothetical protein | M529_05530 | Not Available | + | 1086945 - 1087082 | 5175.38 |
| conjugal transfer protein trbi | M529_05535 | Not Available | + | 1087079 - 1088284 | 41341.4 |
| hypothetical protein | M529_05540 | Not Available | + | 1088288 - 1088518 | 8431.15 |
| hypothetical protein | M529_05545 | Not Available | + | 1088515 - 1088730 | 7920.5 |
| phosphatidylinositol kinase | M529_05550 | Not Available | - | 1088735 - 1090027 | 47046.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

