Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium ummariense |
| Strain | RL-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
831480 bp
Thymine Count
831934 bp
Guanine Count
1547934 bp
Cytosine Count
1542693 bp
Genome Length
4754053 bp
Protein-coding Genes
4608 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative integrase | M529_05455 | Not Available | - | 1073818 - 1075041 | 46517.0 |
| hypothetical protein | M529_05460 | Not Available | - | 1075431 - 1076045 | 21364.8 |
| Is5 family transposase orfb | M529_05465 | Not Available | - | 1076136 - 1076525 | 14925.0 |
| Is5 family transposase orfa | M529_05470 | Not Available | - | 1076546 - 1076893 | 13257.0 |
| Arac family transcriptional regulator | M529_05475 | Not Available | + | 1077164 - 1077490 | 11542.9 |
| Putative radical sam superfamily protein | M529_05480 | Not Available | - | 1077700 - 1078674 | 35790.9 |
| Hypothetical protein | M529_05485 | Not Available | - | 1078671 - 1079264 | 20822.9 |
| Gp273 | M529_05490 | Not Available | + | 1079340 - 1080074 | 26935.3 |
| hypothetical protein | M529_05495 | Not Available | + | 1080074 - 1081057 | 35655.5 |
| inorganic polyphosphate/atp-nad kinase | M529_05500 | Not Available | + | 1081065 - 1081958 | 32688.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

