Rhizobium etli bv. mimosae str. Mim1

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium etli bv. mimosae str. Mim1 is a Gram-negative, rod-shaped bacterium that typically exists as single cells and is classified as an aerobe, requiring oxygen for growth. This strain is host-associated, indicating a symbiotic relationship with host plants, particularly within the legume family. Rhizobium etli bv. mimosae str. Mim1 is known for its role in biological nitrogen fixation, a process crucial for enhancing soil fertility and supporting plant growth. This bacterium forms nodules on the roots of its legume hosts, where it converts atmospheric nitrogen into a form that is usable by plants, thereby playing a vital role in nutrient cycling within ecosystems. The ability of R. etli bv. mimosae str. Mim1 to thrive in a host-associated environment underscores its potential importance in sustainable agriculture, particularly in nitrogen-poor soils. By fostering the growth of leguminous plants, it contributes not only to the health of individual plants but also to the overall stability and productivity of agricultural systems. Understanding the specific interactions between this strain and its host plants could provide insights into optimizing legume cultivation and enhancing soil health in various agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium etli
Strainbv. mimosae Mim1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Rhizobium etli bv. mimosae str. Mim1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

34160 bp

Thymine Count

35138 bp

Guanine Count

56319 bp

Cytosine Count

55696 bp

Genome Length

181313 bp

Protein-coding Genes

174 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
sugar transferaseREMIM1_RS20980Not Available+277 - 84321478.9
polysaccharide biosynthesis proteinREMIM1_RS20985Not Available+967 - 301874692.4
o-antigen ligase family proteinREMIM1_RS20990Not Available-2994 - 426845849.1
hypothetical proteinREMIM1_RS20995Not Available-4598 - 48498797.55
duf2934 domain-containing proteinREMIM1_RS21000Not Available-4887 - 523713275.2
gntr family transcriptional regulatorREMIM1_RS21005Not Available+5456 - 617826125.3
mannonate dehydrataseREMIM1_RS21010Not Available+6224 - 741143843.1
tetr/acrr family transcriptional regulatorREMIM1_RS21015Not Available-7470 - 811723879.1
hlyd family secretion proteinREMIM1_RS21020Not Available+8251 - 943541431.7
dha2 family efflux mfs transporter permease subunitREMIM1_RS21025Not Available+9460 - 1104356189.0

Displaying genes 1 – 10 of 6914 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

36 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm0000976enol-oxaloacetateC4H2O5Chemical structure of enol-oxaloacetateNot available
Average130.056Da
Monoisotopic129.9913203Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001691hydrogenselenideHSeChemical structure of hydrogenselenideNot available
Average79.98Da
Monoisotopic80.924896Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da

Displaying 1–10 of 36 metabolites