Parabacteroides goldsteinii dnLKV18

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides goldsteinii dnLKV18 is a mesophilic microorganism, thriving in temperatures ranging from 25°C to 45°C, which falls under the category of moderate temperature preferences. Its metabolism is heterotrophic, meaning it obtains energy and organic compounds by breaking down complex molecules from its environment. As a chemoheterotroph, it produces energy through the oxidation of organic molecules, rather than by converting light or inorganic compounds. The microbe's energy production process is based on the breakdown of carbohydrates, proteins, and fats, allowing it to grow and multiply in a wide range of environments. As a Gram-negative bacterium, Parabacteroides goldsteinii dnLKV18 has a thin peptidoglycan layer and exhibits a characteristic Gram-staining pattern. In terms of shape, the microbe is a rod-shaped bacterium, also known as a bacillus. It can be found colonizing various body sites, including the gastrointestinal tract, lungs, and skin of humans and animals, as well as soil, water, and other environmental niches. Parabacteroides goldsteinii dnLKV18 is an obligate anaerobe, meaning it requires a reducing environment and cannot survive in the presence of oxygen. This is evident from its ability to grow optimally in environments with low oxygen levels, such as the gastrointestinal tract. Furthermore, Parabacteroides goldsteinii dnLKV18 has been isolated from various environmental samples, including stool, dental plaques, and skin lesions, highlighting its diverse habitat range. The microbe's ability to tolerate a wide range of environmental conditions, including temperature, pH, and oxygen levels, makes it a resilient and adaptable species. This microbe has been linked to various physiological and pathological processes, including the breakdown of complex carbohydrates, the production of short-chain fatty acids, and the modulation of host immune responses. As a result, Parabacteroides goldsteinii dnLKV18 has become a popular subject for research in fields such as microbiome analysis, gut health, and infectious disease. Despite its seemingly ordinary characteristics, Parabacteroides goldsteinii dnLKV18 has emerged as a key player in understanding the complex dynamics of microbial communities and their interactions with their host environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides goldsteinii
StraindnLKV18

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides goldsteinii dnLKV18


Gene Summary

Adenine Count

1989171 bp

Thymine Count

2001475 bp

Guanine Count

1537006 bp

Cytosine Count

1538554 bp

Genome Length

7066206 bp

Protein-coding Genes

5627 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
5s ribosomal rnaNot AvailableNot Available+298 - 407Not Available
hypothetical proteinC803_00003Not Available+540 - 146335390.3
23s ribosomal rnaNot AvailableNot Available+1902 - 4779Not Available
16s ribosomal rnaNot AvailableNot Available+3606 - 5120Not Available
hypothetical proteinC803_00004Not Available-1589 - 375784157.7
elongation factor 4C803_00005Not Available+3842 - 562966333.4
5s ribosomal rnaNot AvailableNot Available+4885 - 4994Not Available
hypothetical proteinC803_00006Not Available-6103 - 695732339.1
hypothetical proteinC803_00007Not Available+7158 - 800330768.3
hypothetical proteinC803_00008Not Available+8018 - 960159556.8

Displaying genes 41 – 50 of 5744 in total

Metabolites

787 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da

Displaying 1–10 of 787 metabolites