Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | + | 1609 - 3124 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 2834 - 2943 | Not Available |
| 2-isopropylmalate synthase | C800_00003 | Not Available | + | 3553 - 5049 | 54450.0 |
| 3-isopropylmalate dehydratase large subunit | C800_00004 | Not Available | + | 5067 - 6449 | 50049.1 |
| 3-isopropylmalate dehydratase, small subunit | C800_00005 | Not Available | + | 6463 - 7059 | 22479.6 |
| d-citramalate synthase | C800_00006 | Not Available | + | 7038 - 8585 | 57810.4 |
| 3-isopropylmalate dehydrogenase | C800_00007 | Not Available | + | 8679 - 9740 | 39089.9 |
| hypothetical protein | C800_00008 | Not Available | + | 9872 - 10204 | 12040.5 |
| hypothetical protein | C800_00009 | Not Available | + | 10197 - 11003 | 30801.8 |
| peptide-methionine (s)-s-oxide reductase | C800_00010 | Not Available | - | 11072 - 11557 | 18625.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

