Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | C800_00031 | Not Available | + | 34859 - 38179 | 122271.0 |
| hypothetical protein | C800_00032 | Not Available | + | 38193 - 39881 | 64144.1 |
| hypothetical protein | C800_00033 | Not Available | + | 39899 - 41575 | 63045.8 |
| atp-binding cassette, subfamily f, member 3 | C800_00034 | Not Available | + | 41972 - 43915 | 73630.3 |
| hypothetical protein | C800_00035 | Not Available | + | 43965 - 45977 | 74934.0 |
| hypothetical protein | C800_00036 | Not Available | + | 46007 - 46510 | 19121.3 |
| efflux transporter, rnd family, mfp subunit | C800_00037 | Not Available | + | 46605 - 47864 | 45794.5 |
| czca family heavy metal efflux pump | C800_00038 | Not Available | + | 47876 - 50959 | 112482.0 |
| hypothetical protein | C800_00039 | Not Available | + | 50970 - 52139 | 43861.6 |
| 5s ribosomal rna | Not Available | Not Available | + | 51807 - 51916 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

