Phocaeicola vulgatus dnLKV7

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola vulgatus dnLKV7 is a Gram-positive, rod-shaped bacterium characterized by its occurrence as single cells and its strict anaerobic metabolism. This microbe is host-associated, indicating a specific ecological relationship with its host, which may play a role in the host's microbiome. As an anaerobe, P. vulgatus dnLKV7 thrives in environments devoid of oxygen, suggesting that it may inhabit anaerobic niches within the host, such as the gastrointestinal tract. The rod shape of P. vulgatus dnLKV7 is typical of many bacteria within the phylum Firmicutes, which often exhibit diverse metabolic capabilities and ecological roles. The ability of this strain to exist as single cells rather than in clusters or chains may indicate a particular adaptation to its host environment, allowing for greater flexibility in nutrient uptake and survival in dynamic physiological conditions. Understanding the specific interactions of P. vulgatus dnLKV7 within its host may provide insights into the broader implications of anaerobic microbial life in health and disease, particularly in relation to gut microbiota composition and function. Its strict anaerobic lifestyle underscores the importance of oxygen-free environments for certain microbial communities, highlighting the intricate balance of microbial interactions within host-associated habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola vulgatus
StraindnLKV7

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Phocaeicola vulgatus dnLKV7
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phocaeicola vulgatus dnLKV7


Gene Summary

Adenine Count

1478248 bp

Thymine Count

1465647 bp

Guanine Count

1081650 bp

Cytosine Count

1086149 bp

Genome Length

5111694 bp

Protein-coding Genes

4244 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
adenylosuccinate synthetaseC800_00021Not Available+21727 - 2299846850.9
hypothetical proteinC800_00022Not Available+23298 - 234626222.65
susc/raga family tonb-linked outer membrane proteinC800_00023Not Available+24738 - 27959118870.0
hypothetical proteinC800_00024Not Available+27981 - 2881431352.5
hypothetical proteinC800_00025Not Available+28801 - 2949026195.7
hypothetical proteinC800_00026Not Available+30091 - 3094232546.0
hypothetical proteinC800_00027Not Available+31219 - 3230140389.5
hypothetical proteinC800_00028Not Available+32551 - 327608062.96
rna polymerase sigma-70 factor, expansion family 1C800_00029Not Available+32935 - 3352523285.1
hypothetical proteinC800_00030Not Available+33596 - 3460939115.7

Displaying genes 21 – 30 of 4326 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites