Paenibacillus alvei DSM 29

RodFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus alvei DSM 29 is a bacterium that thrives in temperatures ranging from mesophilic to thermophilic, categorizing it as a thermophilic microbe (Temperature preference category: Thermophiles). This thermophilic characteristic enables it to inhabit environments that are too hot for most other microorganisms. As a chemoheterotroph, Paenibacillus alvei DSM 29 derives its energy from the breakdown of organic compounds, utilizing a variety of carbon sources for growth. This microbe produces energy through fermentation, a process that does not involve the use of oxygen. Paenibacillus alvei DSM 29 is a Gram-positive bacterium, meaning that its cell wall contains a thick layer of peptidoglycan, which is responsible for its characteristic Gram stain. The bacterium's shape is rod-like, with a typical length of 2-3 μm and a width of 0.5-0.7 μm. Paenibacillus alvei DSM 29 is capable of inhabiting various body sites, including the oral cavity, skin, and respiratory and gastrointestinal tracts. However, it is not commonly associated with disease, as it is typically found as part of the normal commensal flora. As an obligate anaerobe, Paenibacillus alvei DSM 29 requires a low-oxygen environment to survive, making it well-suited to environments where oxygen levels are limited. In addition to its unique characteristics, Paenibacillus alvei DSM 29 has been found to produce a variety of enzymes, including proteases, lipases, and amylases, which are involved in the breakdown of complex nutrients. These enzymes play a crucial role in the microbe's ability to thrive in diverse environments, from soil to human gut. Furthermore, research has demonstrated that Paenibacillus alvei DSM 29 has the potential to degrade a range of pollutants, including heavy metals and pesticides, rendering it a valuable candidate for bioremediation applications. Its ability to produce antibiotics and other bioactive compounds has also sparked interest in its potential use as a probiotic or antimicrobial agent.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus alvei
StrainDSM 29

Profile

Physiology
Gram staining propertiesVariable
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

4192 bp

Thymine Count

3836 bp

Guanine Count

3329 bp

Cytosine Count

2754 bp

Genome Length

14111 bp

Protein-coding Genes

15 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinPAV_RS31955P18016+101 - 135448634.8
hypothetical proteinPAV_RS35175Not Available+1531 - 189613427.6
merr family transcriptional regulatorPAV_RS31965Not Available+2645 - 329224733.2
hypothetical proteinPAV_RS31970Not Available+3713 - 409315260.0
hypothetical proteinPAV_RS31975Not Available+4660 - 531323210.5
hypothetical proteinPAV_RS37110Not Available+5544 - 56664440.39
hypothetical proteinPAV_RS31980Not Available+6025 - 650417654.6
putative holin-like toxinPAV_RS35500Not Available-6926 - 70695599.06
hypothetical proteinPAV_RS31985Not Available-7625 - 78076279.91
hypothetical proteinPAV_RS31990Not Available-7800 - 79887177.34

Displaying genes 1 – 10 of 6897 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

436 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da
BASm00008001,8-diazacyclotetradecane-2,9-dioneC12H22N2O2Chemical structure of 1,8-diazacyclotetradecane-2,9-dioneNot available
Average226.32Da
Monoisotopic226.168127956Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da

Displaying 1–10 of 436 metabolites