Allocoleopsis franciscana PCC 7113

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Coleofasciculales

Family

Coleofasciculaceae

Genus

Allocoleopsis

Description

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderColeofasciculales
FamilyColeofasciculaceae
GenusAllocoleopsis
SpeciesAllocoleopsis franciscana
StrainPCC 7113

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Allocoleopsis franciscana PCC 7113

NC_019762.1NC_019739.1NC_019742.1NC_019761.1NC_019760.1NC_019743.1NC_019741.1NC_019738.1NC_019740.1

Gene Summary

Adenine Count

5470 bp

Thymine Count

5669 bp

Guanine Count

5052 bp

Cytosine Count

4612 bp

Genome Length

20803 bp

Protein-coding Genes

30 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

9

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
6-carboxytetrahydropterin synthaseMIC7113_RS32635P65871+156 - 54514914.6
trna-guanine transglycosylase dpdaMIC7113_RS32640P0DW33+753 - 284979144.2
hypothetical proteinMIC7113_RS32645Not Available+2922 - 380634445.4
hypothetical proteinMIC7113_RS32650Not Available-3831 - 502144839.4
dna sulfur modification protein dndbMIC7113_RS32655Not Available-5069 - 617542029.8
hypothetical proteinMIC7113_RS32660Not Available+6297 - 65399091.85
dead/deah box helicaseMIC7113_RS32665Not Available+6604 - 11622193403.0
phospholipase d-like domain-containing proteinMIC7113_RS32670Not Available+11619 - 1242230619.0
nucleotide pyrophosphohydrolaseMIC7113_RS32675P42979+12592 - 1290912155.3
duf4351 domain-containing proteinMIC7113_RS32680Not Available-13196 - 1429942893.5

Displaying genes 1 – 10 of 6800 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

25 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0001330N-acetyl-D-hexosamineC8H15NO6Chemical structure of N-acetyl-D-hexosamineNot available
Average221.209Da
Monoisotopic221.089937207Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003334aldehydo-D-ribose 5-phosphateC5H11O8PChemical structure of aldehydo-D-ribose 5-phosphateNot available
Average230.1098Da
Monoisotopic230.0191538Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034237-phospho-2-dehydro-3-deoxy-D-arabino-heptonateC7H10O10PChemical structure of 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonateNot available
Average285.122Da
Monoisotopic285.0028043Da

Displaying 1–10 of 25 metabolites