Micromonospora lupini str. Lupac 08

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Micromonospora lupini str. Lupac 08 is a Gram-positive, aerobic bacterium known for its ability to form spores. This strain thrives optimally at a temperature of 29.0°C, suggesting a preference for moderate environmental conditions that may be encountered in specific ecological niches. The sporulation capability of M. lupini str. Lupac 08 indicates its resilience and ability to survive under unfavorable conditions, likely enhancing its adaptability in diverse environments. As a member of the genus Micromonospora, this strain may exhibit characteristics typical of actinobacteria, including complex metabolic pathways and the potential for producing secondary metabolites. However, specific biochemical pathways and metabolic capabilities of M. lupini str. Lupac 08 remain to be elucidated. The ecological role of Micromonospora species, including str. Lupac 08, often involves soil and plant interactions, which could contribute to nutrient cycling and soil health. The ability to form spores may not only facilitate survival but also enable the bacterium to establish itself in various habitats, potentially influencing microbial community dynamics. Further studies could reveal the ecological significance of M. lupini str. Lupac 08 within its native environment, particularly in relation to its interactions with plant hosts and other soil microorganisms.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora lupini
StrainLupac 08

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
Habitatecto- and endo-rhizospheres; ecto- or endo-rhizospheres; nitrogen fixing nodules
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora lupini str. Lupac 08


Gene Summary

Adenine Count

1024577 bp

Thymine Count

1028161 bp

Guanine Count

2632690 bp

Cytosine Count

2635793 bp

Genome Length

7321224 bp

Protein-coding Genes

7019 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
conserved hypothetical proteinMILUP08_40265Not Available-611 - 8629742.2
large-conductance mechanosensitive channelMILUP08_40266A5UVR8-944 - 141717238.3
gntr domain proteinMILUP08_40267O07007-1457 - 213723900.6
major facilitator superfamily mfs_1MILUP08_40268P37482+2248 - 352243211.0
anti-sigma factor antagonistMILUP08_40269Not Available-3536 - 389212494.8
anti-sigma-factor antagonistMILUP08_40270P42409+4058 - 491830659.9
rsbt antagonist protein rsbsMILUP08_40271P42410+4918 - 532814529.6
putative serine/threonine-protein kinaseMILUP08_40272P42411+5325 - 574414596.3
putative anti-sigma regulatory factorMILUP08_40273Not Available+5741 - 674834626.2
two component hybrid sensor histidine kinase (atp-binding domain)MILUP08_40274P23545+6745 - 810648902.3

Displaying genes 1 – 10 of 7106 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

408 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da

Displaying 1–10 of 408 metabolites