Phycisphaera mikurensis NBRC 102666

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Phycisphaerae

Order

Phycisphaerales

Family

Phycisphaeraceae

Genus

Phycisphaera

Description

Taxonomy

KingdomPseudomonadati
PhylumPlanctomycetota
ClassPhycisphaerae
OrderPhycisphaerales
FamilyPhycisphaeraceae
GenusPhycisphaera
SpeciesPhycisphaera mikurensis
StrainNBRC 102666

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phycisphaera mikurensis NBRC 102666

NC_017081.1NC_017080.1

Gene Summary

Adenine Count

508555 bp

Thymine Count

507370 bp

Guanine Count

1395901 bp

Cytosine Count

1391399 bp

Genome Length

3803225 bp

Protein-coding Genes

3039 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
nucleotidyl transferase abieii/abigii toxin family proteinPSMK_RS15420Not Available-1 - 93934824.4
type iv toxin-antitoxin system abiei family antitoxinPSMK_RS15425Not Available-936 - 173928543.7
hypothetical proteinPSMK_RS15430Not Available+2623 - 351032584.9
hypothetical proteinPSMK_RS15435Not Available+3571 - 416120478.1
hypothetical proteinPSMK_RS15440Not Available-4351 - 531936573.1
sprt-like domain-containing proteinPSMK_RS15445Not Available+5421 - 611624585.1
hypothetical proteinPSMK_RS17660Not Available-6131 - 670021398.6
hypothetical proteinPSMK_RS17665Not Available+6686 - 722218652.0
radc family proteinPSMK_RS19555Q67SI7-7482 - 821925879.8
hypothetical proteinPSMK_RS15460Not Available-8614 - 88388043.7

Displaying genes 1 – 10 of 3164 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

193 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da
BASm0000609D-xylono-1,4-lactoneC5H8O5Chemical structure of D-xylono-1,4-lactoneNot available
Average148.114Da
Monoisotopic148.0371734Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da

Displaying 1–10 of 193 metabolites