Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema socranskii |
| Strain | subsp. socranskii VPI DR56BR1116 = ATCC 35536 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
714518 bp
Thymine Count
704962 bp
Guanine Count
689424 bp
Cytosine Count
695724 bp
Genome Length
2804628 bp
Protein-coding Genes
2579 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Adenine-specific methyltransferase | HMPREF1325_1835 | Not Available | + | 82353 - 83072 | 26862.2 |
| Trna-pro; | Not Available | Not Available | + | 82896 - 82969 | Not Available |
| Virion morphogenesis protein | HMPREF1325_1836 | Not Available | + | 83065 - 84402 | 51504.6 |
| hypothetical protein | HMPREF1325_1837 | Not Available | + | 84693 - 85010 | 11014.3 |
| Cmp n-glycosidase | HMPREF1325_1838 | Not Available | + | 85084 - 85386 | 11414.9 |
| hypothetical protein | HMPREF1325_1839 | Not Available | + | 85373 - 85564 | 7111.15 |
| hypothetical protein | HMPREF1325_1840 | Not Available | + | 85649 - 85924 | 10587.8 |
| Hypothetical protein | HMPREF1325_1841 | Not Available | + | 85982 - 86221 | 9513.64 |
| ankyrin repeat protein | HMPREF1325_1842 | Not Available | - | 86264 - 87133 | 32309.0 |
| Ci repressor | HMPREF1325_1843 | Not Available | - | 87160 - 87972 | 30108.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
