Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema socranskii |
| Strain | subsp. paredis ATCC 35535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
704661 bp
Thymine Count
708421 bp
Guanine Count
642887 bp
Cytosine Count
675805 bp
Genome Length
2731774 bp
Protein-coding Genes
2426 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | + | 25 - 134 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 122 - 231 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 267 - 3207 | Not Available |
| hypothetical protein | HMPREF1221_00002 | Not Available | - | 486 - 851 | 14595.3 |
| rlua family pseudouridine synthase | HMPREF1221_00003 | Not Available | - | 853 - 1539 | 25120.5 |
| hypothetical protein | HMPREF1221_00004 | Not Available | + | 1569 - 2759 | 43513.6 |
| excisionase family dna binding domain-containing protein | HMPREF1221_00005 | Not Available | - | 2798 - 3445 | 24249.2 |
| 16s ribosomal rna | Not Available | Not Available | + | 3556 - 5080 | Not Available |
| cytidine deaminase | HMPREF1221_00006 | Not Available | - | 3548 - 3973 | 15194.0 |
| hypothetical protein | HMPREF1221_00007 | Not Available | + | 4283 - 5440 | 43594.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
