Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema denticola |
| Strain | US-Trep |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
855646 bp
Thymine Count
851993 bp
Guanine Count
520327 bp
Cytosine Count
526560 bp
Genome Length
2754526 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9728_00060 | Not Available | - | 66239 - 66739 | 18720.0 |
| formate-tetrahydrofolate ligase | HMPREF9728_00061 | Not Available | - | 66831 - 68534 | 60985.3 |
| glycyl-trna synthetase | HMPREF9728_00062 | Not Available | + | 68662 - 70017 | 52916.6 |
| hypothetical protein | HMPREF9728_00063 | Not Available | + | 70030 - 71031 | 38536.1 |
| hypothetical protein | HMPREF9728_00064 | Not Available | + | 71088 - 71657 | 21817.9 |
| hypothetical protein | HMPREF9728_00065 | Not Available | - | 71689 - 72585 | 34257.8 |
| hypothetical protein | HMPREF9728_00066 | Not Available | - | 72585 - 74258 | 61745.5 |
| hypothetical protein | HMPREF9728_00067 | Not Available | - | 74267 - 74725 | 18214.6 |
| Trna-cys | Not Available | Not Available | + | 74808 - 74879 | Not Available |
| trab family protein | HMPREF9728_00069 | Not Available | - | 74978 - 76168 | 43551.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


