Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | TPANIC_RS00005 | Not Available | + | 4 - 1398 | 52968.4 |
| dna polymerase iii subunit beta | TPANIC_RS00010 | Not Available | + | 1641 - 2756 | 41292.8 |
| dna replication/repair protein recf | TPANIC_RS00015 | Not Available | + | 2701 - 3834 | 44064.4 |
| duf721 domain-containing protein | TPANIC_RS00020 | Not Available | + | 3827 - 4264 | 16338.6 |
| dna topoisomerase (atp-hydrolyzing) subunit a | TPANIC_RS00025 | Not Available | + | 4391 - 6832 | 89931.9 |
| 30s ribosomal protein s16 | TPANIC_RS00035 | Not Available | + | 7203 - 8261 | 39368.2 |
| major outer sheath c-terminal domain-containing protein | TPANIC_RS05525 | Not Available | - | 8341 - 9261 | 33587.1 |
| 30s ribosomal protein s16 | TPANIC_RS05530 | Not Available | - | 9274 - 9447 | 6250.57 |
| major outer sheath n-terminal domain-containing protein | TPANIC_RS05535 | Not Available | - | 9374 - 9952 | 21325.1 |
| major outer sheath c-terminal domain-containing protein | TPANIC_RS00045 | Not Available | + | 10397 - 12379 | 71110.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
