Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema denticola |
| Strain | US-Trep |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
855646 bp
Thymine Count
851993 bp
Guanine Count
520327 bp
Cytosine Count
526560 bp
Genome Length
2754526 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heavy metal translocating p-type atpase | HMPREF9728_00050 | Not Available | + | 54152 - 56782 | 93190.4 |
| hypothetical protein | HMPREF9728_00051 | Not Available | - | 56890 - 57711 | 30859.8 |
| hypothetical protein | HMPREF9728_00052 | Not Available | + | 57796 - 58362 | 21211.5 |
| hypothetical protein | HMPREF9728_00053 | Not Available | + | 58624 - 59271 | 24248.6 |
| hypothetical protein | HMPREF9728_00054 | Not Available | + | 59384 - 60838 | 52139.6 |
| fold protein | HMPREF9728_00055 | Not Available | - | 60924 - 61805 | 31207.4 |
| hypothetical protein | HMPREF9728_00056 | Not Available | + | 62006 - 62623 | 22803.3 |
| hypothetical protein | HMPREF9728_00057 | Not Available | + | 62643 - 63680 | 37598.5 |
| hypothetical protein | HMPREF9728_00058 | Not Available | + | 63673 - 64998 | 49073.2 |
| hypothetical protein | HMPREF9728_00059 | Not Available | - | 65074 - 66102 | 38249.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


