Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema denticola |
| Strain | US-Trep |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
855646 bp
Thymine Count
851993 bp
Guanine Count
520327 bp
Cytosine Count
526560 bp
Genome Length
2754526 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9728_00040 | Not Available | - | 38638 - 39219 | 22373.3 |
| dna polymerase iii, alpha subunit | HMPREF9728_00041 | Not Available | - | 39260 - 42709 | 129946.0 |
| hypothetical protein | HMPREF9728_00042 | Not Available | + | 42855 - 43310 | 17375.6 |
| chromosomal replication initiator protein dnaa | HMPREF9728_00043 | Not Available | - | 43315 - 44724 | 53799.2 |
| dna gyrase subunit b | HMPREF9728_00044 | Not Available | + | 44833 - 46749 | 71409.8 |
| hypothetical protein | HMPREF9728_00045 | Not Available | + | 46772 - 47491 | 26288.9 |
| hypothetical protein | HMPREF9728_00046 | Not Available | + | 47532 - 48206 | 24544.2 |
| hypothetical protein | HMPREF9728_00047 | Not Available | - | 48224 - 49279 | 39183.8 |
| hypothetical protein | HMPREF9728_00048 | Not Available | - | 49349 - 52999 | 136743.0 |
| hypothetical protein | HMPREF9728_00049 | Not Available | + | 53164 - 54018 | 33524.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


