Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Capnocytophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Capnocytophaga |
| Species | Capnocytophaga ochracea |
| Strain | F0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Microaerophilic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
800843 bp
Thymine Count
794604 bp
Guanine Count
518878 bp
Cytosine Count
520992 bp
Genome Length
2635317 bp
Protein-coding Genes
2333 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative 8-amino-7-oxononanoate synthase | HMPREF1977_0046 | Not Available | + | 69434 - 70561 | 41266.3 |
| methionyl-trna formyltransferase | HMPREF1977_0047 | Not Available | - | 70619 - 71569 | 35086.7 |
| hypothetical protein | HMPREF1977_0048 | Not Available | - | 71764 - 72006 | 9327.62 |
| heavy metal efflux pump, czca family | HMPREF1977_0049 | Not Available | + | 72393 - 76724 | 160659.0 |
| efflux transporter, rnd family, mfp subunit | HMPREF1977_0050 | Not Available | + | 76730 - 77914 | 42748.8 |
| site-specific recombinase, phage integrase family | HMPREF1977_0051 | Not Available | - | 78470 - 79705 | 48215.0 |
| sulfate adenylyltransferase, large subunit | HMPREF1977_0052 | Not Available | + | 80802 - 82058 | 46875.8 |
| hypothetical protein | HMPREF1977_0053 | Not Available | - | 82137 - 82607 | 17117.8 |
| hypothetical protein | HMPREF1977_0054 | Not Available | - | 82611 - 82733 | 5004.39 |
| ornithine aminotransferase | HMPREF1977_0055 | Not Available | + | 83078 - 84322 | 45376.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


