Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Capnocytophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Capnocytophaga |
| Species | Capnocytophaga ochracea |
| Strain | DSM 7271 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Microaerophilic |
| Optimal temperature | 35 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Chains - Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
789447 bp
Thymine Count
789074 bp
Guanine Count
517190 bp
Cytosine Count
517214 bp
Genome Length
2612925 bp
Protein-coding Genes
2165 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | + | 1017380 - 1017395 | Not Available |
| 3_nc_021792: site specific recombinase, tyrosine | COCH_RS04280 | Not Available | + | 1017454 - 1018743 | 49727.8 |
| helix-turn-helix domain-containing protein | COCH_RS04285 | Not Available | - | 1018757 - 1019029 | 10778.2 |
| hypothetical protein | COCH_RS04290 | Not Available | - | 1019149 - 1019361 | 8461.11 |
| hypothetical protein | COCH_RS04300 | Not Available | + | 1020066 - 1021121 | 38696.5 |
| hypothetical protein | COCH_RS04305 | Not Available | + | 1021147 - 1022223 | 39991.6 |
| 1_nc_021800: hypothetical protein | COCH_RS04310 | Not Available | + | 1022297 - 1022866 | 20880.6 |
| hypothetical protein | COCH_RS04315 | Not Available | + | 1022887 - 1023345 | 17402.7 |
| 1_nc_021800: phage portal protein | COCH_RS04320 | Not Available | + | 1023369 - 1024538 | 44654.7 |
| 1_nc_021800: structural protein | COCH_RS04325 | Not Available | + | 1024535 - 1025059 | 20516.6 |
Pathways
393 pathways


