Halalkalicoccus jeotgali B3

CocciNon-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Halalkalicoccaceae

Genus

Halalkalicoccus

Description

Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) is non-motile cocci, extreme halophilic, Gram-variable archaeon isolated from shrimp jeotgal, a traditional Korean fermented seafood. (adapted from PMID: 20601480). (HAMAP: HALJB)

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHalalkalicoccaceae
GenusHalalkalicoccus
SpeciesHalalkalicoccus jeotgali
StrainB3

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Shrimp
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Halalkalicoccus jeotgali B3

NC_014300.1NC_014299.1NC_014297.1NC_014301.1NC_014298.1NC_014303.1NC_014302.1

Gene Summary

Adenine Count

90434 bp

Thymine Count

91315 bp

Guanine Count

112812 bp

Cytosine Count

111724 bp

Genome Length

406285 bp

Protein-coding Genes

363 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
transposaseHACJB3_RS18075Not Available-190 - 208272231.2
recombinase family proteinHACJB3_RS19430Not Available-2388 - 314928777.7
winged helix-turn-helix transcriptional regulatorHACJB3_RS18085Not Available-3328 - 392421843.5
hypothetical proteinHACJB3_RS18090Not Available+4180 - 451812168.2
pentapeptide repeat-containing proteinHACJB3_RS18095Not Available+4992 - 528810089.5
pentapeptide repeat-containing proteinHACJB3_RS18100Not Available+5278 - 55058546.11
potassium channel family proteinHACJB3_RS18105Not Available+5539 - 612321343.8
duf63 family proteinHACJB3_RS19435Not Available-6938 - 747718228.6
class i sam-dependent methyltransferaseHACJB3_RS18115Not Available-7529 - 818824217.6
copper-translocating p-type atpaseHACJB3_RS18120Not Available-8185 - 1026374728.1

Displaying genes 1 – 10 of 3922 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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