Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema phagedenis |
| Strain | F0421 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845641 bp
Thymine Count
847850 bp
Guanine Count
564459 bp
Cytosine Count
569947 bp
Genome Length
2827897 bp
Protein-coding Genes
3146 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9554_00001 | Not Available | + | 113 - 442 | 12037.4 |
| 23s ribosomal rna | Not Available | Not Available | + | 133 - 3092 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 218 - 328 | Not Available |
| hypothetical protein | HMPREF9554_00002 | Not Available | + | 439 - 611 | 6662.32 |
| 16s ribosomal rna | Not Available | Not Available | + | 591 - 2127 | Not Available |
| atp-dependent dna helicase, recq family | HMPREF9554_00003 | Q9CL21 | + | 612 - 2349 | 65329.4 |
| Ncrna_class:srp_rna | Not Available | Not Available | + | 2406 - 2504 | Not Available |
| hypothetical protein | HMPREF9554_00004 | Not Available | - | 2401 - 3201 | 30020.3 |
| phosphoribosyl transferase domain protein | HMPREF9554_00005 | O83462 | - | 3232 - 4296 | 40294.3 |
| hypothetical protein | HMPREF9554_00006 | Not Available | - | 4417 - 4950 | 19526.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
