Escherichia coli Xuzhou21

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli Xuzhou21 is a Gram-negative, rod-shaped bacterium typically found in pairs or as single cells, demonstrating its adaptability to various environments. This strain thrives optimally at 37.0°C, a temperature that aligns with the physiological conditions of warm-blooded hosts, reflecting its host-associated habitat. As a facultative anaerobe, E. coli Xuzhou21 can utilize oxygen when available but is also capable of fermentative metabolism in anaerobic conditions, allowing it to survive in diverse microenvironments within its host. The ability of E. coli Xuzhou21 to exist in pairs or as single cells may facilitate its colonization and interaction with host tissues, potentially enhancing its survival and adaptation strategies. Given its optimal growth temperature and metabolic versatility, E. coli Xuzhou21 may play a significant role in the microbiota of its host, where it could contribute to nutrient cycling and the maintenance of intestinal homeostasis. Understanding the specific ecological role of E. coli Xuzhou21 within its host could provide insights into the complex interactions between microbial communities and their hosts, particularly in terms of health and disease dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainXuzhou21

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli Xuzhou21
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli Xuzhou21


Gene Summary

Adenine Count

24869 bp

Thymine Count

23720 bp

Guanine Count

23873 bp

Cytosine Count

20266 bp

Genome Length

92728 bp

Protein-coding Genes

96 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
type ii secretion system protein gspcCDCO157_RS27535P31699+2589 - 346432303.4
variant type ii secretion system secretin etpdCDCO157_RS27540P15644+3465 - 543271495.6
type ii secretion system atpase gspeCDCO157_RS27545Q01566+5432 - 693755932.5
type ii secretion system inner membrane protein gspfCDCO157_RS27550P31705+6939 - 816244900.6
type ii secretion system major pseudopilin gspgCDCO157_RS27555A0A0H3HDD6+8193 - 862716239.4
type ii secretion system minor pseudopilin gsphCDCO157_RS27560A0A0H3H546+8624 - 917820775.2
type ii secretion system minor pseudopilin gspiCDCO157_RS27565P15748+9193 - 954012777.4
type ii secretion system minor pseudopilin gspjCDCO157_RS27570A0A0H3H7Y9+9537 - 1013622705.6
type ii secretion system minor pseudopilin gspkCDCO157_RS27575P15750+10133 - 1111036853.8
type ii secretion system protein gsplCDCO157_RS27580P31707+11044 - 1232148155.7

Displaying genes 1 – 10 of 5524 in total

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00037801D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside 3-phosphateC14H24NO14PChemical structure of 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside 3-phosphateNot available
Average461.314Da
Monoisotopic461.094538615Da
BASm0004129((9Z)-hexadecenoyl-tetradecanoyl)-(Kdo)2-lipid AC114H202N2O39P2Chemical structure of ((9Z)-hexadecenoyl-tetradecanoyl)-(Kdo)2-lipid ANot available
Average2286.796Da
Monoisotopic2285.339290168Da

Displaying 1–3 of 3 metabolites