Escherichia coli Xuzhou21

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli Xuzhou21 is a Gram-negative, rod-shaped bacterium typically found in pairs or as single cells, demonstrating its adaptability to various environments. This strain thrives optimally at 37.0°C, a temperature that aligns with the physiological conditions of warm-blooded hosts, reflecting its host-associated habitat. As a facultative anaerobe, E. coli Xuzhou21 can utilize oxygen when available but is also capable of fermentative metabolism in anaerobic conditions, allowing it to survive in diverse microenvironments within its host. The ability of E. coli Xuzhou21 to exist in pairs or as single cells may facilitate its colonization and interaction with host tissues, potentially enhancing its survival and adaptation strategies. Given its optimal growth temperature and metabolic versatility, E. coli Xuzhou21 may play a significant role in the microbiota of its host, where it could contribute to nutrient cycling and the maintenance of intestinal homeostasis. Understanding the specific ecological role of E. coli Xuzhou21 within its host could provide insights into the complex interactions between microbial communities and their hosts, particularly in terms of health and disease dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainXuzhou21

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli Xuzhou21
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli Xuzhou21


Gene Summary

Adenine Count

1333901 bp

Thymine Count

1331610 bp

Guanine Count

1362009 bp

Cytosine Count

1358701 bp

Genome Length

5386223 bp

Protein-coding Genes

4607 genes

Non-Coding Genes

769 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system protein gspcCDCO157_RS27535P31699Positive2589 - 346432303.4
variant type ii secretion system secretin etpdCDCO157_RS27540P15644Positive3465 - 543271495.6
type ii secretion system atpase gspeCDCO157_RS27545Q01566Positive5432 - 693755932.5
type ii secretion system inner membrane protein gspfCDCO157_RS27550P31705Positive6939 - 816244900.6
type ii secretion system major pseudopilin gspgCDCO157_RS27555A0A0H3HDD6Positive8193 - 862716239.4
type ii secretion system minor pseudopilin gsphCDCO157_RS27560A0A0H3H546Positive8624 - 917820775.2
type ii secretion system minor pseudopilin gspiCDCO157_RS27565P15748Positive9193 - 954012777.4
type ii secretion system minor pseudopilin gspjCDCO157_RS27570A0A0H3H7Y9Positive9537 - 1013622705.6
type ii secretion system minor pseudopilin gspkCDCO157_RS27575P15750Positive10133 - 1111036853.8
type ii secretion system protein gsplCDCO157_RS27580P31707Positive11044 - 1232148155.7

Displaying genes 1 – 10 of 5524 in total

Metabolites

307 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 307 metabolites

Health Effects

No health effects information available for this bacterium.