Bifidobacterium longum subsp. longum F8

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium longum subsp. longum F8 is a type of microbe that thrives in a temperature range of 37°C to 42°C, placing it in the category of thermophilic microorganisms. In terms of metabolism, it is a heterotroph, utilizing organic compounds as its energy source to produce ATP through fermentation. This process involves the breakdown of nutrients in the absence of oxygen, releasing lactic acid as a byproduct. Gram-staining reveals that Bifidobacterium longum subsp. longum F8 is a Gram-positive bacterium, characterized by its thick peptidoglycan layer. In terms of shape, this microbe is rod-shaped, with a length of approximately 0.5-1.5 μm. It is capable of inhabiting various body sites, including the gastrointestinal tract, respiratory tract, and skin. The oxygen preference of Bifidobacterium longum subsp. longum F8 is that of a facultative anaerobe, meaning it can survive and grow in both aerobic and anaerobic environments. As a member of the Bifidobacterium genus, this microbe is known for its beneficial effects on human health. It plays a crucial role in the colonization of the infant gut, aiding in the digestion and absorption of nutrients. Additionally, it has been shown to produce antimicrobial compounds, which can help to suppress the growth of pathogenic bacteria. In summary, Bifidobacterium longum subsp. longum F8 is a thermophilic, fermentative, Gram-positive, rod-shaped bacterium that exhibits facultative anaerobic characteristics. Its ability to thrive in a variety of environments and produce beneficial compounds makes it an important microbe in maintaining human health. Furthermore, its unique properties have led to its potential use as a probiotic in the prevention and treatment of various disorders, including irritable bowel syndrome and allergy.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium longum
Strainsubsp. longum F8

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Bifidobacterium longum subsp. longum F8
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementClusters - Pairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium longum subsp. longum F8


Gene Summary

Adenine Count

472711 bp

Thymine Count

478047 bp

Guanine Count

711175 bp

Cytosine Count

710652 bp

Genome Length

2384987 bp

Protein-coding Genes

1959 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
16s ribosomal rnaNot AvailableNot Available+216 - 1741Not Available
23s ribosomal rnaNot AvailableNot Available+2173 - 5238Not Available
5s ribosomal rnaNot AvailableNot Available+5409 - 5525Not Available
gnat family n-acetyltransferaseBIL_RS00030Not Available-5906 - 640618780.0
oleate hydrataseBIL_RS00035B9E972-6503 - 838070481.0
duf4186 domain-containing proteinBIL_RS00040P76148-8586 - 899615646.6
dna polymerase iii subunit alphaBIL_RS00045Q9Z618-9109 - 12666131124.0
transposaseBIL_RS11405Not Available+13024 - 1347317383.3
duf6508 domain-containing proteinBIL_RS00055Not Available+13504 - 1393816411.4
duf262 domain-containing proteinBIL_RS00060Not Available+13943 - 1525351178.3

Displaying genes 1 – 10 of 2022 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

117 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00006985-dehydro-2-deoxy-D-gluconateC6H9O6Chemical structure of 5-dehydro-2-deoxy-D-gluconateNot available
Average177.133Da
Monoisotopic177.04046159Da
BASm0000738D-lyxoseC5H10O5Chemical structure of D-lyxose1114-34-7
Average150.1299Da
Monoisotopic150.05282343Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da

Displaying 1–10 of 117 metabolites