Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Gin | PFRI_10850 | Not Available | + | 1097380 - 1098288 | 33929.0 |
| Plasmid partition protein sopa | PFRI_10860 | Not Available | + | 1098631 - 1099830 | 44485.0 |
| Hth dna binding protein | PFRI_10870 | Not Available | + | 1099830 - 1100798 | 35295.9 |
| Putative dna replication protein, repc family | PFRI_10880 | Not Available | + | 1101037 - 1102092 | 39717.4 |
| hypothetical protein | PFRI_10890 | Not Available | + | 1102092 - 1102334 | 8806.62 |
| Hypothetical protein | PFRI_10900 | Not Available | - | 1102305 - 1103507 | 44771.3 |
| hypothetical protein | PFRI_10910 | Not Available | + | 1103801 - 1104271 | 17104.8 |
| Putative ardc-like antirestriction protein | PFRI_10920 | Not Available | + | 1104311 - 1105252 | 35238.6 |
| hypothetical protein | PFRI_10930 | Not Available | + | 1105276 - 1105485 | 7928.44 |
| Hypothetical protein | PFRI_10940 | Not Available | + | 1105573 - 1105962 | 14283.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
