Oceanithermus profundus DSM 14977

Gram-negativeBacilliNon-motileMicroaerophilic

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Thermales

Family

Thermaceae

Genus

Oceanithermus

Description

Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) is an moderately thermophilic, organotrophic, microaerophilic, facultatively chemolithotrophic, Gram-positive bacterium isolated from a deep-sea hydrothermal vent site at 13 degrees N in the East Pacific Rise. Cells are Gram-negative, non-motile rods. The organism grows in the temperature range between 40 and 68 degrees Celsius, with an optimum at 60 degrees Celsius, and in the pH range is between 5.5-8.4, with an optimum around pH 7.5. The NaCl concentration for growth is in the range 10-50 g/l, with an optimum at 30 g/l. O. profundus grows chemoorganoheterotrophically with carbohydrates, proteinaceous substrates, organic acids and alcohols using oxygen or nitrate as electron acceptor. Alternatively, it is able to grow lithoheterotrophically with molecular hydrogen as the energy source. (Adapted from PMID: 12807196). (EBI Integr8)

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderThermales
FamilyThermaceae
GenusOceanithermus
SpeciesOceanithermus profundus
StrainDSM 14977

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Oceanithermus profundus DSM 14977
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature60
Temperature rangeThermophilic
HabitatDeep sea- Hydrothermal vent- Marine
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoorganoheterotroph- Lithoheterotroph- Organotroph
PathogenicityNo

Genome Summary

Oceanithermus profundus DSM 14977


Gene Summary

Adenine Count

21463 bp

Thymine Count

24233 bp

Guanine Count

45948 bp

Cytosine Count

43707 bp

Genome Length

135351 bp

Protein-coding Genes

147 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaOCEPR_RS00010Not Available+60 - 138849550.4
dna polymerase iii subunit betaOCEPR_RS00015Not Available+1649 - 273439213.1
phosphopyruvate hydrataseOCEPR_RS00020Not Available+2755 - 402345516.9
pyruvate kinaseOCEPR_RS00025Not Available+4013 - 544051021.6
vwa domain-containing proteinOCEPR_RS12065Not Available+5443 - 652239630.8
hypothetical proteinOCEPR_RS00035Not Available+6531 - 67859906.82
transcriptional activator, tena familyOCEPR_RS00040Not Available+6796 - 741623555.1
phzf family phenazine biosynthesis proteinOCEPR_RS00045Not Available-7413 - 821028624.1
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseOCEPR_RS00050Not Available-8207 - 869217225.7
hd domain-containing proteinOCEPR_RS00055Not Available+8735 - 931021461.4

Displaying genes 1 – 10 of 2456 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites