Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase daca | DD586_RS05665 | Not Available | - | 1261868 - 1263079 | 44285.3 |
| endolytic peptidoglycan transglycosylase rlpa | DD586_RS05670 | Not Available | - | 1263259 - 1264407 | 39824.9 |
| peptidoglycan glycosyltransferase mrdb | DD586_RS05675 | Not Available | - | 1264417 - 1265529 | 40501.4 |
| peptidoglycan dd-transpeptidase mrda | DD586_RS05680 | Not Available | - | 1265537 - 1267447 | 71809.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | DD586_RS05685 | Not Available | - | 1267484 - 1267954 | 17610.4 |
| ribosome silencing factor | DD586_RS05690 | Not Available | - | 1267956 - 1268273 | 11552.7 |
| nicotinate-nucleotide adenylyltransferase | DD586_RS05695 | Not Available | - | 1268443 - 1269102 | 25069.8 |
| dna polymerase iii subunit delta | DD586_RS05700 | Not Available | - | 1269107 - 1270138 | 39259.0 |
| lps assembly lipoprotein lpte | DD586_RS05705 | Not Available | - | 1270135 - 1270689 | 20455.8 |
| leucine--trna ligase | DD586_RS05710 | Not Available | - | 1270704 - 1273286 | 97255.0 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling