Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(65) synthase truc | DD586_RS04625 | Not Available | + | 1023279 - 1024064 | 29739.7 |
| flavodoxin | DD586_RS04630 | Not Available | + | 1024083 - 1024535 | 16166.0 |
| duf3461 family protein | DD586_RS04635 | Not Available | - | 1024671 - 1025057 | 15067.9 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | DD586_RS04640 | Not Available | - | 1025183 - 1026007 | 29852.8 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | DD586_RS04645 | Not Available | - | 1026082 - 1028766 | 103206.0 |
| type i methionyl aminopeptidase | DD586_RS04650 | Not Available | - | 1028817 - 1029611 | 29441.5 |
| 30s ribosomal protein s2 | DD586_RS04655 | Not Available | + | 1029978 - 1030703 | 26809.2 |
| translation elongation factor ts | DD586_RS04660 | Not Available | + | 1030829 - 1031686 | 30725.1 |
| ump kinase | DD586_RS04665 | Not Available | + | 1031857 - 1032588 | 26196.9 |
| ribosome recycling factor | DD586_RS04670 | Not Available | + | 1032730 - 1033287 | 20749.0 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling