Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pitrilysin | DD586_RS04525 | Not Available | + | 1003590 - 1006487 | 107872.0 |
| amino-acid n-acetyltransferase | DD586_RS04530 | Not Available | - | 1006634 - 1007959 | 49308.6 |
| n-acetylmuramoyl-l-alanine amidase amic | DD586_RS04535 | Not Available | + | 1008183 - 1009421 | 46062.4 |
| Trna-met | Not Available | Not Available | + | 1009485 - 1009561 | Not Available |
| Trna-met | Not Available | Not Available | + | 1009601 - 1009677 | Not Available |
| murein transglycosylase a | DD586_RS04550 | Not Available | + | 1009890 - 1011050 | 42129.1 |
| gnat family n-acetyltransferase | DD586_RS04555 | Not Available | - | 1011089 - 1011568 | 17589.3 |
| d-2-hydroxyacid dehydrogenase family protein | DD586_RS04560 | Not Available | - | 1011568 - 1012581 | 36587.6 |
| gnat family n-acetyltransferase | DD586_RS04565 | Not Available | - | 1012601 - 1013047 | 17233.9 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | DD586_RS04570 | Not Available | + | 1013311 - 1014138 | 29446.5 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling