Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | DD586_RS04335 | Not Available | + | 955687 - 956829 | 40122.2 |
| efflux rnd transporter permease subunit | DD586_RS04340 | Not Available | + | 956829 - 959894 | 109834.0 |
| conjugal transfer protein traf | DD586_RS04345 | Not Available | - | 959970 - 961217 | 43816.5 |
| helix-turn-helix domain-containing protein | DD586_RS04350 | Not Available | + | 961875 - 962270 | 14916.3 |
| atpase aaa | DD586_RS04355 | Not Available | - | 962315 - 962842 | 20241.6 |
| abc transporter substrate-binding protein | DD586_RS04360 | Not Available | - | 963075 - 964181 | 40713.9 |
| pd-(d/e)xk nuclease family protein | DD586_RS22215 | Not Available | + | 964480 - 964779 | 11369.6 |
| pd-(d/e)xk nuclease family protein | DD586_RS22220 | Not Available | + | 964751 - 965017 | 10131.2 |
| hypothetical protein | DD586_RS22225 | Not Available | + | 965130 - 965696 | 22182.9 |
| fic family protein | DD586_RS04370 | Not Available | + | 966267 - 967409 | 42829.4 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling