Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| inositol 2-dehydrogenase | DD586_RS03595 | Not Available | + | 796445 - 797431 | 36073.1 |
| substrate-binding domain-containing protein | DD586_RS03600 | Not Available | + | 797497 - 798435 | 33182.8 |
| sugar abc transporter atp-binding protein | DD586_RS03605 | Not Available | + | 798492 - 800039 | 56816.6 |
| abc transporter permease | DD586_RS03610 | Not Available | + | 800056 - 801090 | 36695.0 |
| gfo/idh/moca family protein | DD586_RS03615 | Not Available | + | 801108 - 802241 | 41076.1 |
| bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2- deoxyphosphogluconate aldolase | DD586_RS03620 | Not Available | + | 802296 - 804257 | 71623.0 |
| myo-inosose-2 dehydratase | DD586_RS03625 | Not Available | + | 804288 - 805178 | 32484.6 |
| 5-deoxy-glucuronate isomerase | DD586_RS03630 | Not Available | + | 805202 - 806029 | 30911.3 |
| lytic murein transglycosylase b | DD586_RS03635 | Not Available | - | 806429 - 807532 | 40595.2 |
| nucleoside recognition domain-containing protein | DD586_RS03640 | Not Available | + | 807810 - 808742 | 32554.0 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling