Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | DD586_RS03300 | Not Available | + | 721169 - 721546 | 14380.4 |
| dtdp-glucose 4,6-dehydratase | DD586_RS03305 | Not Available | + | 722020 - 723087 | 39538.7 |
| glucose-1-phosphate thymidylyltransferase rfba | DD586_RS03310 | Not Available | + | 723087 - 723950 | 31909.2 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DD586_RS03315 | Not Available | + | 724212 - 724763 | 21125.0 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | DD586_RS03320 | Not Available | + | 724906 - 726327 | 52552.5 |
| phosphomannomutase/phosphoglucomutase | DD586_RS03325 | Not Available | + | 726343 - 727704 | 50550.3 |
| abc transporter permease | DD586_RS21165 | Not Available | + | 727786 - 728637 | 32785.0 |
| abc transporter atp-binding protein | DD586_RS03330 | Not Available | + | 728642 - 729394 | 27031.4 |
| phenylacetate--coa ligase family protein | DD586_RS03335 | Not Available | + | 729381 - 730775 | 53475.2 |
| polysaccharide deacetylase | DD586_RS03340 | Not Available | + | 730772 - 732337 | 58277.9 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling