Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| giy-yig nuclease family protein | DD586_RS03100 | Not Available | - | 682300 - 682602 | 11508.9 |
| deoxyribose-phosphate aldolase | DD586_RS03105 | Not Available | + | 683457 - 684236 | 27208.5 |
| thymidine phosphorylase | DD586_RS03110 | Not Available | + | 684297 - 685628 | 47502.2 |
| phosphopentomutase | DD586_RS03115 | Not Available | + | 685711 - 686934 | 44006.0 |
| purine-nucleoside phosphorylase | DD586_RS03120 | Not Available | + | 687028 - 687753 | 26214.7 |
| ribosomal protein s18-alanine n-acetyltransferase | DD586_RS03125 | Not Available | - | 688090 - 688533 | 16717.0 |
| dna polymerase iii subunit psi | DD586_RS03130 | Not Available | - | 688502 - 688921 | 15611.6 |
| 16s rrna (guanine(1207)-n(2))-methyltransferase rsmc | DD586_RS03135 | Not Available | + | 689096 - 690124 | 37306.6 |
| syme family type i addiction module toxin | DD586_RS03140 | Not Available | - | 690193 - 691188 | 36221.5 |
| lysr family transcriptional regulator | DD586_RS03145 | Not Available | + | 691303 - 692205 | 33545.8 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling