Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| spor domain-containing protein | DD586_RS18905 | Not Available | - | 4331610 - 4332683 | 37841.4 |
| 3-dehydroquinate synthase | DD586_RS18910 | Not Available | - | 4332818 - 4333903 | 38869.4 |
| shikimate kinase arok | DD586_RS18915 | Not Available | - | 4333957 - 4334478 | 19533.2 |
| dna uptake porin hofq | DD586_RS18920 | Not Available | - | 4334819 - 4336120 | 47370.5 |
| hofp dna utilization family protein | DD586_RS18925 | Not Available | - | 4336124 - 4336414 | 10835.8 |
| hypothetical protein | DD586_RS18930 | Not Available | - | 4336537 - 4337097 | 21055.9 |
| piln domain-containing protein | DD586_RS18935 | Not Available | - | 4337094 - 4337654 | 21120.6 |
| type iv pilus biogenesis protein pilm | DD586_RS18940 | Not Available | - | 4337648 - 4338526 | 32608.4 |
| peptidoglycan glycosyltransferase/peptidoglycan dd-transpeptidase mrca | DD586_RS18945 | Not Available | + | 4338782 - 4341340 | 93460.3 |
| adp compounds hydrolase nude | DD586_RS18950 | Not Available | - | 4341496 - 4342050 | 20825.2 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling