Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | + | 4239320 - 4239435 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 4239564 - 4242469 | Not Available |
| Trna-glu | Not Available | Not Available | + | 4242662 - 4242737 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | + | 4242824 - 4244366 | Not Available |
| gamma carbonic anhydrase family protein | DD586_RS18405 | Not Available | + | 4244830 - 4245375 | 19734.8 |
| duf1488 domain-containing protein | DD586_RS18410 | Not Available | - | 4245397 - 4245669 | 10862.8 |
| shikimate dehydrogenase | DD586_RS18415 | Not Available | - | 4245666 - 4246493 | 29588.5 |
| l-threonylcarbamoyladenylate synthase type 1 tsac | DD586_RS18420 | Not Available | - | 4246512 - 4247081 | 20731.0 |
| type i dna topoisomerase | DD586_RS21580 | Not Available | - | 4247074 - 4247625 | 20718.9 |
| duf494 family protein | DD586_RS18430 | Not Available | - | 4247645 - 4248118 | 18387.8 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling