Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| co-chaperone djla | DD586_RS17730 | Not Available | - | 4079482 - 4080441 | 36145.4 |
| lps assembly protein lptd | DD586_RS17735 | Not Available | + | 4080592 - 4082991 | 90946.7 |
| peptidylprolyl isomerase sura | DD586_RS17740 | Not Available | + | 4083090 - 4084382 | 47182.4 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DD586_RS17745 | Not Available | + | 4084382 - 4085383 | 35721.3 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | DD586_RS17750 | Not Available | + | 4085376 - 4086194 | 30451.8 |
| co2+/mg2+ efflux protein apag | DD586_RS17755 | Not Available | + | 4086210 - 4086587 | 14161.1 |
| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) apah | DD586_RS17760 | Not Available | + | 4086594 - 4087445 | 31353.5 |
| hypothetical protein | DD586_RS17765 | Not Available | - | 4087482 - 4087676 | 7021.27 |
| type 3 dihydrofolate reductase | DD586_RS17770 | Not Available | - | 4087923 - 4088405 | 17918.2 |
| threonine/serine exporter | DD586_RS17775 | Not Available | - | 4088553 - 4089023 | 17037.7 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling