Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | DD586_RS16975 | Not Available | - | 3890702 - 3891964 | 45930.7 |
| lysr family transcriptional regulator | DD586_RS16980 | Not Available | + | 3892077 - 3893009 | 34532.7 |
| hcp family type vi secretion system effector | DD586_RS16985 | Not Available | + | 3893269 - 3893748 | 18180.5 |
| hypothetical protein | DD586_RS16990 | Not Available | + | 3893750 - 3893956 | 7864.49 |
| duf4225 domain-containing protein | DD586_RS22525 | Not Available | + | 3893957 - 3894586 | 24025.7 |
| hypothetical protein | DD586_RS16995 | Not Available | - | 3894691 - 3895074 | 15178.2 |
| abc transporter atp-binding protein | DD586_RS17000 | Not Available | - | 3895499 - 3896491 | 36249.8 |
| abc transporter permease | DD586_RS17005 | Not Available | - | 3896525 - 3897307 | 28936.4 |
| abc transporter permease subunit | DD586_RS17010 | Not Available | - | 3897328 - 3898170 | 31145.7 |
| alkaline phosphatase family protein | DD586_RS17015 | Not Available | - | 3898167 - 3898991 | 30905.6 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling