Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (s)-s-oxide reductase msra | DD586_RS16725 | Not Available | + | 3836613 - 3837254 | 23735.9 |
| hemolysin family protein | DD586_RS16730 | Not Available | + | 3837415 - 3838731 | 48828.8 |
| duf1107 domain-containing protein | DD586_RS16735 | Not Available | - | 3838810 - 3839016 | 7992.0 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | DD586_RS16740 | Not Available | - | 3839440 - 3840180 | 27297.5 |
| bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | DD586_RS16745 | Not Available | + | 3840412 - 3842358 | 71123.2 |
| iron-sulfur cluster repair protein ytfe | DD586_RS16750 | Not Available | + | 3842497 - 3843162 | 24982.1 |
| duf2502 domain-containing protein | DD586_RS16755 | Not Available | - | 3843250 - 3843615 | 13459.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DD586_RS16760 | Not Available | - | 3843948 - 3844568 | 22266.4 |
| lysm-like peptidoglycan-binding domain-containing protein | DD586_RS16765 | Not Available | + | 3844920 - 3845666 | 28402.6 |
| duf488 domain-containing protein | DD586_RS16770 | Not Available | - | 3845663 - 3846022 | 13990.0 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling