Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | DD586_RS16425 | Not Available | + | 3757064 - 3757771 | 26176.5 |
| proline--trna ligase | DD586_RS16430 | Not Available | + | 3757887 - 3759605 | 63811.6 |
| rna polymerase sigma factor rpos | DD586_RS16435 | Not Available | - | 3759704 - 3760696 | 38135.2 |
| murein hydrolase activator nlpd | DD586_RS16440 | Not Available | - | 3760750 - 3761991 | 42704.6 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | DD586_RS16445 | Not Available | - | 3762380 - 3763006 | 23273.2 |
| trna pseudouridine(13) synthase trud | DD586_RS16450 | Not Available | - | 3763135 - 3764181 | 39129.4 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | DD586_RS16455 | Not Available | - | 3764181 - 3764678 | 17725.3 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | DD586_RS16460 | Not Available | - | 3764703 - 3765410 | 25783.9 |
| cell division protein ftsb | DD586_RS16465 | Not Available | - | 3765413 - 3765766 | 12955.3 |
| duf3561 family protein | DD586_RS16470 | Not Available | - | 3765965 - 3766420 | 16625.0 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling