Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | DD586_RS16225 | Not Available | - | 3714640 - 3715305 | 24317.6 |
| transporter substrate-binding domain-containing protein | DD586_RS16230 | Not Available | - | 3715315 - 3716106 | 28369.5 |
| murr/rpir family transcriptional regulator | DD586_RS16235 | Not Available | - | 3716382 - 3717221 | 31834.5 |
| gamma-glutamyltransferase family protein | DD586_RS16240 | Not Available | + | 3717448 - 3719037 | 56358.3 |
| oxalurate catabolism protein hpxx | DD586_RS16245 | Not Available | + | 3719065 - 3719262 | 7513.01 |
| atze family amidohydrolase | DD586_RS16250 | Not Available | + | 3719259 - 3720671 | 49969.6 |
| oxalurate catabolism protein hpxz | DD586_RS16255 | Not Available | + | 3720668 - 3721063 | 15102.6 |
| allantoinase puue | DD586_RS16260 | Not Available | - | 3721275 - 3722222 | 36294.7 |
| allantoin racemase | DD586_RS16265 | Not Available | - | 3722266 - 3723003 | 25460.2 |
| gntr family transcriptional regulator | DD586_RS16270 | Not Available | - | 3723000 - 3723743 | 27204.6 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling