Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome maturation factor rimm | DD586_RS15750 | Not Available | - | 3614158 - 3614706 | 20750.7 |
| 30s ribosomal protein s16 | DD586_RS15755 | Not Available | - | 3614725 - 3614973 | 9084.0 |
| signal recognition particle protein | DD586_RS15760 | Not Available | - | 3615132 - 3616493 | 49913.5 |
| inner membrane protein ypjd | DD586_RS15765 | Not Available | + | 3616666 - 3617460 | 29646.6 |
| s-ribosylhomocysteine lyase | DD586_RS15770 | Not Available | - | 3617566 - 3618081 | 19267.2 |
| glutamate--cysteine ligase | DD586_RS15775 | Not Available | - | 3618248 - 3619798 | 58171.4 |
| yqaa family protein | DD586_RS15780 | Not Available | - | 3619879 - 3620307 | 15426.3 |
| fructose-1-phosphate/6-phosphogluconate phosphatase | DD586_RS15785 | Not Available | - | 3620304 - 3620870 | 20754.9 |
| Trna-arg | Not Available | Not Available | + | 3621054 - 3621130 | Not Available |
| Trna-arg | Not Available | Not Available | + | 3621189 - 3621265 | Not Available |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling