Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease iii | DD586_RS15355 | Not Available | - | 3536073 - 3536753 | 25564.7 |
| signal peptidase i | DD586_RS15360 | Not Available | - | 3536937 - 3537905 | 35691.1 |
| translation elongation factor 4 | DD586_RS15365 | Not Available | - | 3537921 - 3539720 | 66606.4 |
| soxr-reducing system protein rsec | DD586_RS15370 | Not Available | - | 3539982 - 3540452 | 16844.7 |
| sigma-e factor regulatory protein rseb | DD586_RS15375 | Not Available | - | 3540449 - 3541399 | 35174.8 |
| anti-sigma-e factor rsea | DD586_RS15380 | Not Available | - | 3541399 - 3542064 | 24146.7 |
| rna polymerase sigma factor rpoe | DD586_RS15385 | Not Available | - | 3542114 - 3542689 | 21778.8 |
| l-aspartate oxidase | DD586_RS15390 | Not Available | + | 3543045 - 3544649 | 59714.4 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase trmn | DD586_RS15395 | Not Available | - | 3544752 - 3545513 | 27546.7 |
| atp-dependent rna helicase srmb | DD586_RS15400 | Not Available | + | 3545660 - 3547012 | 50680.8 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling