Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | DD586_RS15105 | Not Available | - | 3478811 - 3479932 | 40775.2 |
| cytoskeleton protein rodz | DD586_RS15110 | Not Available | - | 3479969 - 3480985 | 36220.9 |
| type iv pilus biogenesis/stability protein pilw | DD586_RS15115 | Not Available | - | 3480975 - 3481730 | 27730.8 |
| bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmn | DD586_RS15120 | Not Available | - | 3481929 - 3483107 | 43634.7 |
| nucleoside-diphosphate kinase | DD586_RS15125 | Not Available | - | 3483284 - 3483712 | 15488.3 |
| 3-mercaptopyruvate sulfurtransferase | DD586_RS15130 | Not Available | + | 3484129 - 3484983 | 30534.4 |
| enhanced serine sensitivity protein sseb | DD586_RS15135 | Not Available | - | 3485102 - 3485896 | 29540.8 |
| aminopeptidase pepb | DD586_RS15140 | Not Available | - | 3485991 - 3487286 | 46858.4 |
| fe-s cluster assembly protein iscx | DD586_RS15145 | Not Available | - | 3487402 - 3487602 | 7786.98 |
| isc system 2fe-2s type ferredoxin | DD586_RS15150 | Not Available | - | 3487614 - 3487949 | 12378.5 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling