Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| multidrug effflux mfs transporter | DD586_RS21105 | Not Available | - | 3405878 - 3407140 | 44386.5 |
| gfo/idh/moca family oxidoreductase | DD586_RS14910 | Not Available | - | 3407137 - 3408660 | 57743.6 |
| carbamoyltransferase c-terminal domain-containing protein | DD586_RS14915 | Not Available | - | 3408677 - 3410383 | 63180.5 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | DD586_RS14920 | Not Available | - | 3410398 - 3411219 | 31334.7 |
| lysr substrate-binding domain-containing protein | DD586_RS14925 | Not Available | - | 3411946 - 3412842 | 32593.6 |
| carboxymuconolactone decarboxylase family protein | DD586_RS14930 | Not Available | + | 3412955 - 3413260 | 11308.4 |
| tautomerase family protein | DD586_RS14935 | Not Available | + | 3413264 - 3413650 | 14996.8 |
| duf4865 family protein | DD586_RS14940 | Not Available | + | 3413647 - 3414177 | 19853.8 |
| voc family protein | DD586_RS14945 | Not Available | - | 3414220 - 3414612 | 14341.7 |
| duf3750 domain-containing protein | DD586_RS14950 | Not Available | - | 3414857 - 3415636 | 28144.9 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling