Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein | DD586_RS07245 | Not Available | - | 1655416 - 1656132 | 26825.4 |
| virb3 family type iv secretion system protein | DD586_RS07250 | Not Available | - | 1656157 - 1658904 | 103282.0 |
| trbc/virb2 family protein | DD586_RS07255 | Not Available | - | 1658915 - 1659196 | 9793.02 |
| lytic transglycosylase domain-containing protein | DD586_RS07260 | Not Available | - | 1659210 - 1659857 | 23406.8 |
| hypothetical protein | DD586_RS07265 | Not Available | - | 1659927 - 1660163 | 8406.99 |
| duf2971 domain-containing protein | DD586_RS07270 | Not Available | + | 1660688 - 1661554 | 33812.9 |
| Trna-asn | Not Available | Not Available | + | 1676757 - 1676832 | Not Available |
| syme family type i addiction module toxin | DD586_RS07355 | Not Available | + | 1677216 - 1677482 | 9958.2 |
| d-serine/d-alanine/glycine transporter | DD586_RS07360 | Not Available | - | 1677564 - 1678967 | 51077.7 |
| Trna-lys | Not Available | Not Available | + | 1679296 - 1679371 | Not Available |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling