Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | DD586_RS22460 | Not Available | - | 1475461 - 1475790 | 12177.5 |
| lysr family transcriptional regulator | DD586_RS06605 | Not Available | - | 1475862 - 1476755 | 33074.6 |
| nadh-dependent flavin oxidoreductase | DD586_RS06610 | Not Available | + | 1476912 - 1478063 | 41291.4 |
| duf4440 domain-containing protein | DD586_RS06615 | Not Available | + | 1478240 - 1478644 | 14750.5 |
| wbuc family cupin fold metalloprotein | DD586_RS06620 | Not Available | - | 1479019 - 1479495 | 17688.0 |
| efflux rnd transporter permease subunit | DD586_RS06625 | Not Available | - | 1479880 - 1483014 | 112843.0 |
| efflux rnd transporter periplasmic adaptor subunit | DD586_RS06630 | Not Available | - | 1483035 - 1484297 | 45442.9 |
| response regulator | DD586_RS06635 | Not Available | + | 1484431 - 1485177 | 27535.6 |
| atp-binding protein | DD586_RS06640 | Not Available | + | 1485174 - 1486250 | 38979.3 |
| lysr family transcriptional regulator | DD586_RS06645 | Not Available | - | 1486285 - 1487232 | 34617.1 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling