Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | DD586_RS06505 | Not Available | + | 1450219 - 1451757 | 56815.5 |
| type vi secretion system-associated protein vasi | DD586_RS06510 | Not Available | + | 1451757 - 1452320 | 20437.2 |
| type vi secretion system protein tssa | DD586_RS06515 | Not Available | + | 1452332 - 1453768 | 52154.1 |
| type vi secretion system membrane subunit tssm | DD586_RS06520 | Not Available | + | 1453794 - 1457291 | 132160.0 |
| vasl domain-containing protein | DD586_RS06525 | Not Available | + | 1457344 - 1458777 | 54556.6 |
| tetratricopeptide repeat protein | DD586_RS06530 | Not Available | + | 1458859 - 1460229 | 50321.0 |
| dknyy domain-containing protein | DD586_RS06535 | Not Available | + | 1460385 - 1461317 | 34452.8 |
| d-amino-acid transaminase | DD586_RS06540 | Not Available | - | 1461384 - 1462244 | 31850.2 |
| n-acetyl-d-glu racemase dgca | DD586_RS06545 | Not Available | - | 1462244 - 1463254 | 36649.2 |
| n-acetyltransferase dgcn | DD586_RS06550 | Not Available | - | 1463265 - 1464257 | 35309.6 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling